HL_4Z8C_210

3D structure

PDB id

4Z8C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCCGGGGAAACUCGGG

Length

16 nucleotides

Bulged bases

4Z8C|1|1a|A|155

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4Z8C|1|1a|C|148
4Z8C|1|1a|C|149
4Z8C|1|1a|C|150
4Z8C|1|1a|G|151
4Z8C|1|1a|G|152
4Z8C|1|1a|G|153
4Z8C|1|1a|G|154
4Z8C|1|1a|A|155
4Z8C|1|1a|A|156
4Z8C|1|1a|A|157
4Z8C|1|1a|C|158
4Z8C|1|1a|U|159
4Z8C|1|1a|C|160
4Z8C|1|1a|G|161
4Z8C|1|1a|G|162
4Z8C|1|1a|G|163

Current chains

Chain 1a

16S ribosomal RNA

Nearby chains

Chain 1T

50S ribosomal protein L19

Chain 1t

30S ribosomal protein S20