HL_4ZSN_008

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4ZSN_008 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.0603

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4ZSN|1|QA|C|320
4ZSN|1|QA|A|321
4ZSN|1|QA|C|322
4ZSN|1|QA|U|323
4ZSN|1|QA|G|324
4ZSN|1|QA|A|325
4ZSN|1|QA|G|326
4ZSN|1|QA|A|327
4ZSN|1|QA|C|328
4ZSN|1|QA|A|329
4ZSN|1|QA|C|330
4ZSN|1|QA|G|331
4ZSN|1|QA|G|332
4ZSN|1|QA|G|333

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16

Chain QT

30S ribosomal protein S20