HL_4ZSN_096

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGUCCACAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4ZSN_096 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.3048

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4ZSN|1|RA|C|2471
4ZSN|1|RA|G|2472
4ZSN|1|RA|U|2473
4ZSN|1|RA|C|2474
4ZSN|1|RA|C|2475
4ZSN|1|RA|A|2476
4ZSN|1|RA|C|2477
4ZSN|1|RA|A|2478
4ZSN|1|RA|G|2479

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36

Chain RQ

50S ribosomal protein L16