HL_4ZSN_184

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4ZSN|1|YA|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4ZSN_184 not in the Motif Atlas

Geometric match to HL_5D5L_003

Geometric discrepancy: 0.1039

The information below is about HL_5D5L_003

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4ZSN|1|YA|C|1691
4ZSN|1|YA|U|1692
4ZSN|1|YA|U|1693
4ZSN|1|YA|C|1694
4ZSN|1|YA|G|1695
4ZSN|1|YA|G|1696

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XA

Small subunit ribosomal RNA; SSU rRNA

Chain YD

50S ribosomal protein L2