HL_5AA0_029
3D structure
- PDB id
- 5AA0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5AA0_029 not in the Motif Atlas
- Homologous match to HL_9DFE_028
- Geometric discrepancy: 0.5398
- The information below is about HL_9DFE_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AA0|1|AA|C|1092||||P_1
5AA0|1|AA|G|1093||||P_1
5AA0|1|AA|U|1094||||P_1
5AA0|1|AA|A|1095||||P_1
5AA0|1|AA|A|1096||||P_1
5AA0|1|AA|U|1097||||P_1
5AA0|1|AA|A|1098||||P_1
5AA0|1|AA|G|1099||||P_1
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AH
- 50S ribosomal protein L6
- Chain AJ
- 50S ribosomal protein L11
- Chain Af
- 50S ribosomal protein L36
- Chain BZ
- GTP-binding protein
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