HL_5AA0_113
3D structure
- PDB id
- 5AA0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- AGGGCUAGGGGGCCCACCAGCCUACCAAACCCU
- Length
- 33 nucleotides
- Bulged bases
- 5AA0|1|AA|G|883||||P_1, 5AA0|1|AA|C|884||||P_1, 5AA0|1|AA|C|885||||P_1, 5AA0|1|AA|C|886||||P_1, 5AA0|1|AA|A|887||||P_1, 5AA0|1|AA|C|888||||P_1, 5AA0|1|AA|A|896||||P_1
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AA0|1|AA|A|872||||P_1
5AA0|1|AA|G|873||||P_1
5AA0|1|AA|G|874||||P_1
5AA0|1|AA|G|875||||P_1
5AA0|1|AA|C|876||||P_1
5AA0|1|AA|U|877||||P_1
5AA0|1|AA|A|878||||P_1
5AA0|1|AA|G|879||||P_1
5AA0|1|AA|G|880||||P_1
5AA0|1|AA|G|881||||P_1
5AA0|1|AA|G|882||||P_1
5AA0|1|AA|G|883||||P_1
5AA0|1|AA|C|884||||P_1
5AA0|1|AA|C|885||||P_1
5AA0|1|AA|C|886||||P_1
5AA0|1|AA|A|887||||P_1
5AA0|1|AA|C|888||||P_1
5AA0|1|AA|C|889||||P_1
5AA0|1|AA|A|890||||P_1
5AA0|1|AA|G|892||||P_1
5AA0|1|AA|C|893||||P_1
5AA0|1|AA|C|894||||P_1
5AA0|1|AA|U|895||||P_1
5AA0|1|AA|A|896||||P_1
5AA0|1|AA|C|897||||P_1
5AA0|1|AA|C|898||||P_1
5AA0|1|AA|A|899||||P_1
5AA0|1|AA|A|900||||P_1
5AA0|1|AA|A|901||||P_1
5AA0|1|AA|C|902||||P_1
5AA0|1|AA|C|903||||P_1
5AA0|1|AA|C|904||||P_1
5AA0|1|AA|U|905||||P_1
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AN
- 50S ribosomal protein L16
- Chain AW
- 50S ribosomal protein L25
- Chain BD
- Transfer RNA; tRNA
- Chain BQ
- 30S ribosomal protein S13
Coloring options: