HL_5ADY_010

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ADY_010 not in the Motif Atlas

Homologous match to HL_4WF9_008

Geometric discrepancy: 0.2573

The information below is about HL_4WF9_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76371.2

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

14

Unit IDs

5ADY|1|B|C|246
5ADY|1|B|G|247
5ADY|1|B|G|248
5ADY|1|B|C|249
5ADY|1|B|G|250
5ADY|1|B|A|251
5ADY|1|B|G|252

Current chains

Chain B

23S RRNA

Nearby chains

Chain 3

50S RIBOSOMAL PROTEIN L35

Chain L

50S RIBOSOMAL PROTEIN L15