HL_5ADY_019

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CCUUUUGUAUAAUG

Length

14 nucleotides

Bulged bases

5ADY|1|B|A|574

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ADY|1|B|C|564
5ADY|1|B|C|565
5ADY|1|B|U|566
5ADY|1|B|U|567
5ADY|1|B|U|568
5ADY|1|B|U|569
5ADY|1|B|G|570
5ADY|1|B|U|571
5ADY|1|B|A|572
5ADY|1|B|U|573
5ADY|1|B|A|574
5ADY|1|B|A|575
5ADY|1|B|U|576
5ADY|1|B|G|577

Current chains

Chain B

23S RRNA

Nearby chains

Chain D

50S RIBOSOMAL PROTEIN L3

Chain L

50S RIBOSOMAL PROTEIN L15

Chain Q

50S RIBOSOMAL PROTEIN L20

Chain R

50S RIBOSOMAL PROTEIN L21