HL_5ADY_077
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GCCGAAAGGC
- Length
- 10 nucleotides
- Bulged bases
- 5ADY|1|B|C|1363
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ADY_077 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.3091
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
5ADY|1|B|G|1361
5ADY|1|B|C|1362
5ADY|1|B|C|1363
5ADY|1|B|G|1364
5ADY|1|B|A|1365
5ADY|1|B|A|1366
5ADY|1|B|A|1367
5ADY|1|B|G|1368
5ADY|1|B|G|1369
5ADY|1|B|C|1370
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 2
- 50S RIBOSOMAL PROTEIN L34
- Chain C
- 50S RIBOSOMAL PROTEIN L2
- Chain X
- 50S RIBOSOMAL PROTEIN L28
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