HL_5AJ4_015

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCCAAUUC

Length

8 nucleotides

Bulged bases

5AJ4|1|AA|C|599, 5AJ4|1|AA|U|604

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ4|1|AA|G|598
5AJ4|1|AA|C|599
5AJ4|1|AA|C|600
5AJ4|1|AA|A|601
5AJ4|1|AA|A|602
5AJ4|1|AA|U|603
5AJ4|1|AA|U|604
5AJ4|1|AA|C|605

Current chains

Chain AA

MITORIBOSOMAL 12S Ribosomal RNA

Nearby chains

Chain AE

MITORIBOSOMAL PROTEIN US5M, MRPS5

Chain AN

MITORIBOSOMAL PROTEIN US14M, MRPS14

Chain Ai

MITORIBOSOMAL PROTEIN MS33, MRPS33

Chain Ao

MITORIBOSOMAL PROTEIN MS39, MRPS39