HL_5AJ4_067

3D structure

PDB id

5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 55S mammalian mitoribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

(Y5P)(P5P)(P5P)(P5P)

Length

4 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5AJ4_067 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2582

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

5AJ4|1|BB|Y5P|13
5AJ4|1|BB|P5P|14
5AJ4|1|BB|P5P|15
5AJ4|1|BB|P5P|23

Current chains

Chain BB

MITORIBOSOMAL CP TRNA

Nearby chains

Chain BS

MITORIBOSOMAL PROTEIN UL18M, MRPL18

Chain Bb

MITORIBOSOMAL PROTEIN ML38, MRPL38