HL_5AXM_006
3D structure
- PDB id
- 5AXM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Thg1 like protein (TLP) with tRNA(Phe)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.21 Å
Loop
- Sequence
- GUUCGAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33239.15
- Basepair signature
- cWW-R-R-tWH-R-R-R
- Number of instances in this motif group
- 108
Unit IDs
5AXM|1|P|G|53||||2_555
5AXM|1|P|U|54||||2_555
5AXM|1|P|U|55||||2_555
5AXM|1|P|C|56||||2_555
5AXM|1|P|G|57||||2_555
5AXM|1|P|A|58||||2_555
5AXM|1|P|U|59||||2_555
5AXM|1|P|C|60||||2_555
5AXM|1|P|C|61||||2_555
Current chains
- Chain P
- RNA (75-MER)
Nearby chains
- Chain B
- tRNA(His)-5'-guanylyltransferase (Thg1) like protein
Coloring options: