HL_5AXN_002

3D structure

PDB id

5AXN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Thg1 like protein (TLP) with tRNA(Phe) and GDPNP

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CAGAUCUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5AXN_002 not in the Motif Atlas

Homologous match to HL_2BTE_002

Geometric discrepancy: 0.4887

The information below is about HL_2BTE_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AXN|1|P|C|28
5AXN|1|P|A|29
5AXN|1|P|G|30
5AXN|1|P|A|38
5AXN|1|P|U|39
5AXN|1|P|C|40
5AXN|1|P|U|41
5AXN|1|P|G|42

Current chains

Chain P

RNA (75-MER)

Nearby chains