HL_5B63_003

3D structure

PDB id

5B63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structures of E.coli arginyl-tRNA synthetase (ArgRS) in complex with substrate tRNA(Arg)

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAAUUGGAUAG

Length

11 nucleotides

Bulged bases

5B63|1|D|U|916, 5B63|1|D|U|917, 5B63|1|D|G|918, 5B63|1|D|G|919, 5B63|1|D|A|920, 5B63|1|D|U|921

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_25462.3

Basepair signature

cWW-cWS

Number of instances in this motif group

23

Unit IDs

5B63|1|D|C|913
5B63|1|D|A|914
5B63|1|D|A|915
5B63|1|D|U|916
5B63|1|D|U|917
5B63|1|D|G|918
5B63|1|D|G|919
5B63|1|D|A|920
5B63|1|D|U|921
5B63|1|D|A|922
5B63|1|D|G|923

Current chains

Chain D

tRNA-Arg

Nearby chains

Chain C

Arginine--tRNA ligase