HL_5C45_001
3D structure
- PDB id
- 5C45 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Selective Small Molecule Inhibition of the FMN Riboswitch
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.93 Å
Loop
- Sequence
- GUGAAAUUC
- Length
- 9 nucleotides
- Bulged bases
- 5C45|1|X|U|23, 5C45|1|X|U|24
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 bulged bases not stacked
- Broad Annotation
- T-loop
- Motif group
- HL_58705.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
5C45|1|X|G|17
5C45|1|X|U|18
5C45|1|X|G|19
5C45|1|X|A|20
5C45|1|X|A|21
5C45|1|X|A|22
5C45|1|X|U|23
5C45|1|X|U|24
5C45|1|X|C|25
Current chains
- Chain X
- FMN Riboswitch
Nearby chains
- Chain Y
- FMN Riboswitch
Coloring options: