HL_5CZP_064

3D structure

PDB id

5CZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UUAGAAGCA

Length

9 nucleotides

Bulged bases

5CZP|1|RA|A|1067, 5CZP|1|RA|G|1068, 5CZP|1|RA|C|1072

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5CZP_064 not in the Motif Atlas

Geometric match to HL_7KI3_001

Geometric discrepancy: 0.1872

The information below is about HL_7KI3_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

5CZP|1|RA|U|1065
5CZP|1|RA|U|1066
5CZP|1|RA|A|1067
5CZP|1|RA|G|1068
5CZP|1|RA|A|1069
5CZP|1|RA|A|1070
5CZP|1|RA|G|1071
5CZP|1|RA|C|1072
5CZP|1|RA|A|1073

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QY

Peptide chain release factor 2