HL_5CZP_201

3D structure

PDB id

5CZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGUGUGGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5CZP_201 not in the Motif Atlas

Homologous match to HL_7RQB_059

Geometric discrepancy: 0.0549

The information below is about HL_7RQB_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40210.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

12

Unit IDs

5CZP|1|YA|C|2404
5CZP|1|YA|G|2405
5CZP|1|YA|U|2406
5CZP|1|YA|G|2407
5CZP|1|YA|U|2408
5CZP|1|YA|G|2409
5CZP|1|YA|G|2410
5CZP|1|YA|A|2411
5CZP|1|YA|A|2412
5CZP|1|YA|G|2413

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain YP

50S ribosomal protein L15