HL_5CZP_216

3D structure

PDB id

5CZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

G(PSU)AAC(5MU)A(PSU)AA(4OC)

Length

11 nucleotides

Bulged bases

5CZP|1|RA|A|1913, 5CZP|1|RA|C|1914

QA status

Modified nucleotides: PSU, 5MU, 4OC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5CZP|1|RA|G|1910
5CZP|1|RA|PSU|1911
5CZP|1|RA|A|1912
5CZP|1|RA|A|1913
5CZP|1|RA|C|1914
5CZP|1|RA|5MU|1915
5CZP|1|RA|A|1916
5CZP|1|RA|PSU|1917
5CZP|1|RA|A|1918
5CZP|1|RA|A|1919
5CZP|1|RA|4OC|1920

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain QV

Transfer RNA; tRNA

Chain QY

Peptide chain release factor 2