HL_5CZZ_001
3D structure
- PDB id
- 5CZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Staphylococcus aureus Cas9 in complex with sgRNA and target DNA (TTGAAT PAM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_43074.13
- Basepair signature
- cWW-tSH-R-R
- Number of instances in this motif group
- 275
Unit IDs
5CZZ|1|B|G|34
5CZZ|1|B|G|35
5CZZ|1|B|A|36
5CZZ|1|B|A|37
5CZZ|1|B|A|38
5CZZ|1|B|C|39
Current chains
- Chain B
- RNA (73-MER)
Nearby chains
No other chains within 10ÅColoring options: