HL_5DAT_034
3D structure
- PDB id
- 5DAT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of yeast 80S ribosome with hypusine-containing eIF5A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GGCCUGAUUUUAUGCAGGCC
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5DAT|1|1|G|1560
5DAT|1|1|G|1561
5DAT|1|1|C|1562
5DAT|1|1|C|1563
5DAT|1|1|U|1564
5DAT|1|1|G|1565
5DAT|1|1|A|1566
5DAT|1|1|U|1567
5DAT|1|1|U|1568
5DAT|1|1|U|1569
5DAT|1|1|U|1570
5DAT|1|1|A|1571
5DAT|1|1|U|1572
5DAT|1|1|G|1573
5DAT|1|1|C|1574
5DAT|1|1|A|1575
5DAT|1|1|G|1576
5DAT|1|1|G|1577
5DAT|1|1|C|1578
5DAT|1|1|C|1579
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain L2
- 60S ribosomal protein L2-A
- Chain L8
- 60S ribosomal protein L8-A
- Chain N5
- 60S ribosomal protein L25
Coloring options: