HL_5DC3_076

3D structure

PDB id

5DC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of yeast 80S ribosome with non-modified eIF5A

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

UCGACCCUUUGGAAGA

Length

16 nucleotides

Bulged bases

5DC3|1|2|U|194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5DC3|1|2|U|185
5DC3|1|2|C|186
5DC3|1|2|G|187
5DC3|1|2|A|188
5DC3|1|2|C|189
5DC3|1|2|C|190
5DC3|1|2|C|191
5DC3|1|2|U|192
5DC3|1|2|U|193
5DC3|1|2|U|194
5DC3|1|2|G|195
5DC3|1|2|G|196
5DC3|1|2|A|197
5DC3|1|2|A|198
5DC3|1|2|G|199
5DC3|1|2|A|200

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S8

40S ribosomal protein S8-A