HL_5DDO_002
3D structure
- PDB id
- 5DDO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural and Dynamic Basis for Low Affinity-High Selectivity Binding of L-glutamine by the Gln-riboswitch
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUUGCACUCCG
- Length
- 12 nucleotides
- Bulged bases
- 5DDO|1|A|C|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_98984.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 31
Unit IDs
5DDO|1|A|C|34
5DDO|1|A|A|35
5DDO|1|A|U|36
5DDO|1|A|U|37
5DDO|1|A|G|38
5DDO|1|A|C|39
5DDO|1|A|A|40
5DDO|1|A|C|41
5DDO|1|A|U|42
5DDO|1|A|C|43
5DDO|1|A|C|44
5DDO|1|A|G|45
Current chains
- Chain A
- L-glutamine riboswitch (58-MER)
Nearby chains
- Chain G
- U1 small nuclear ribonucleoprotein A
Coloring options: