HL_5DFE_064
3D structure
- PDB id
- 5DFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUGGCUUAGAAGCAGCCAUCC
- Length
- 22 nucleotides
- Bulged bases
- 5DFE|1|RA|A|1067, 5DFE|1|RA|G|1068, 5DFE|1|RA|C|1072, 5DFE|1|RA|C|1076
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5DFE|1|RA|G|1058
5DFE|1|RA|G|1059
5DFE|1|RA|U|1060
5DFE|1|RA|G|1062
5DFE|1|RA|G|1063
5DFE|1|RA|C|1064
5DFE|1|RA|U|1065
5DFE|1|RA|U|1066
5DFE|1|RA|A|1067
5DFE|1|RA|G|1068
5DFE|1|RA|A|1069
5DFE|1|RA|A|1070
5DFE|1|RA|G|1071
5DFE|1|RA|C|1072
5DFE|1|RA|A|1073
5DFE|1|RA|G|1074
5DFE|1|RA|C|1075
5DFE|1|RA|C|1076
5DFE|1|RA|A|1077
5DFE|1|RA|U|1078
5DFE|1|RA|C|1079
5DFE|1|RA|C|1080
Current chains
- Chain RA
- T23S rRNA
Nearby chains
- Chain QY
- Peptide chain release factor 2
- Chain RQ
- 50S ribosomal protein L16
- Chain RZ
- 50S ribosomal protein L25
Coloring options: