HL_5DFE_071
3D structure
- PDB id
- 5DFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUGGACG
- Length
- 8 nucleotides
- Bulged bases
- 5DFE|1|RA|U|1453
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5DFE_071 not in the Motif Atlas
- Geometric match to HL_7RQB_037
- Geometric discrepancy: 0.0577
- The information below is about HL_7RQB_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32426.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
5DFE|1|RA|C|1451
5DFE|1|RA|A|1452
5DFE|1|RA|U|1453
5DFE|1|RA|G|1455
5DFE|1|RA|G|1456
5DFE|1|RA|A|1457
5DFE|1|RA|C|1458
5DFE|1|RA|G|1459
Current chains
- Chain RA
- T23S rRNA
Nearby chains
- Chain RR
- 50S ribosomal protein L17
Coloring options: