HL_5DFE_084
3D structure
- PDB id
- 5DFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 5DFE|1|RA|U|1955
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5DFE_084 not in the Motif Atlas
- Homologous match to HL_7RQB_049
- Geometric discrepancy: 0.054
- The information below is about HL_7RQB_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51824.1
- Basepair signature
- cWW-F-F-tSH-F-F
- Number of instances in this motif group
- 8
Unit IDs
5DFE|1|RA|G|1949
5DFE|1|RA|G|1950
5DFE|1|RA|U|1951
5DFE|1|RA|A|1952
5DFE|1|RA|A|1953
5DFE|1|RA|G|1954
5DFE|1|RA|U|1955
5DFE|1|RA|U|1956
5DFE|1|RA|C|1957
Current chains
- Chain RA
- T23S rRNA
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain QY
- Peptide chain release factor 2
- Chain RO
- 50S ribosomal protein L14
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