HL_5DFE_119
3D structure
- PDB id
- 5DFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCAGCC(7MG)C
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 7MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5DFE_119 not in the Motif Atlas
- Homologous match to HL_4LFB_013
- Geometric discrepancy: 0.0825
- The information below is about HL_4LFB_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5DFE|1|XA|G|521
5DFE|1|XA|C|522
5DFE|1|XA|A|523
5DFE|1|XA|G|524
5DFE|1|XA|C|525
5DFE|1|XA|C|526
5DFE|1|XA|7MG|527
5DFE|1|XA|C|528
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XL
- 30S ribosomal protein S12
- Chain XX
- messenger RNA
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