HL_5DGE_012

3D structure

PDB id

5DGE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

UGCCUCGGUA

Length

10 nucleotides

Bulged bases

5DGE|1|1|U|545, 5DGE|1|1|C|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5DGE|1|1|U|541
5DGE|1|1|G|542
5DGE|1|1|C|543
5DGE|1|1|C|544
5DGE|1|1|U|545
5DGE|1|1|C|546
5DGE|1|1|G|547
5DGE|1|1|G|548
5DGE|1|1|U|549
5DGE|1|1|A|550

Current chains

Chain 1

25S ribosomal RNA

Nearby chains