3D structure

PDB id
5E7K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
CUACGG
Length
6 nucleotides
Bulged bases
5E7K|1|13|G|1453
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_5E7K_030 not in the Motif Atlas
Homologous match to HL_6CZR_102
Geometric discrepancy: 0.4011
The information below is about HL_6CZR_102
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_52463.1
Basepair signature
cWW-F-F-F
Number of instances in this motif group
1

Unit IDs

5E7K|1|13|C|1449
5E7K|1|13|U|1450
5E7K|1|13|A|1451
5E7K|1|13|C|1452
5E7K|1|13|G|1453
5E7K|1|13|G|1454

Current chains

Chain 13
16S rRNA

Nearby chains

Chain BI
30S ribosomal protein S20

Coloring options:


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