HL_5E7K_086

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGGACGGAAAUCC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E7K|1|14|G|2302
5E7K|1|14|G|2303
5E7K|1|14|G|2304
5E7K|1|14|A|2305
5E7K|1|14|C|2306
5E7K|1|14|G|2307
5E7K|1|14|G|2308
5E7K|1|14|A|2309
5E7K|1|14|A|2310
5E7K|1|14|A|2311
5E7K|1|14|U|2312
5E7K|1|14|C|2313
5E7K|1|14|C|2314

Current chains

Chain 14

23S rRNA

Nearby chains

Chain 1J

5S ribosomal RNA; 5S rRNA

Chain 49

50S ribosomal protein L5