HL_5E7K_161

3D structure

PDB id

5E7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAAGACAGCCGGUCGAG

Length

18 nucleotides

Bulged bases

5E7K|1|1H|A|1046, 5E7K|1|1H|G|1106

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E7K|1|1H|C|1043
5E7K|1|1H|G|1044
5E7K|1|1H|A|1045
5E7K|1|1H|A|1046
5E7K|1|1H|G|1047
5E7K|1|1H|A|1048
5E7K|1|1H|C|1049
5E7K|1|1H|A|1050
5E7K|1|1H|G|1051
5E7K|1|1H|C|1052
5E7K|1|1H|C|1053
5E7K|1|1H|G|1106
5E7K|1|1H|G|1107
5E7K|1|1H|U|1108
5E7K|1|1H|C|1109
5E7K|1|1H|G|1110
5E7K|1|1H|A|1111
5E7K|1|1H|G|1112

Current chains

Chain 1H

23S rRNA

Nearby chains

Chain 51

50S ribosomal protein L6