HL_5E81_011
3D structure
- PDB id
- 5E81 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- CUUCGG
- Length
- 6 nucleotides
- Bulged bases
- 5E81|1|13|U|421
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5E81_011 not in the Motif Atlas
- Homologous match to HL_4LFB_011
- Geometric discrepancy: 0.1458
- The information below is about HL_4LFB_011
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.5
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
5E81|1|13|C|419
5E81|1|13|U|420
5E81|1|13|U|421
5E81|1|13|C|422
5E81|1|13|G|423
5E81|1|13|G|424
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 2E
- 30S ribosomal protein S3
- Chain 3E
- 30S ribosomal protein S4
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