HL_5E81_060

3D structure

PDB id

5E81 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CCAGGAUGUUGGAAGCAGCCAAGAGUGCGAGCUCACUGG

Length

39 nucleotides

Bulged bases

5E81|1|14|U|1061

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5E81|1|14|C|1052
5E81|1|14|C|1053
5E81|1|14|A|1054
5E81|1|14|G|1055
5E81|1|14|G|1056
5E81|1|14|A|1057
5E81|1|14|U|1058
5E81|1|14|G|1059
5E81|1|14|U|1060
5E81|1|14|U|1061
5E81|1|14|G|1062
5E81|1|14|G|1063
5E81|1|14|A|1069
5E81|1|14|A|1070
5E81|1|14|G|1071
5E81|1|14|C|1072
5E81|1|14|A|1073
5E81|1|14|G|1074
5E81|1|14|C|1075
5E81|1|14|C|1076
5E81|1|14|A|1085
5E81|1|14|A|1086
5E81|1|14|G|1087
5E81|1|14|A|1088
5E81|1|14|G|1089
5E81|1|14|U|1090
5E81|1|14|G|1091
5E81|1|14|C|1092
5E81|1|14|G|1093
5E81|1|14|A|1098
5E81|1|14|G|1099
5E81|1|14|C|1100
5E81|1|14|U|1101
5E81|1|14|C|1102
5E81|1|14|A|1103
5E81|1|14|C|1104
5E81|1|14|U|1105
5E81|1|14|G|1106
5E81|1|14|G|1107

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 45

50S ribosomal protein L16