HL_5E81_146
3D structure
- PDB id
- 5E81 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- GGACCACC
- Length
- 8 nucleotides
- Bulged bases
- 5E81|1|1H|G|411
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5E81_146 not in the Motif Atlas
- Homologous match to HL_7RQB_014
- Geometric discrepancy: 0.0756
- The information below is about HL_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_96598.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 15
Unit IDs
5E81|1|1H|G|410
5E81|1|1H|G|411
5E81|1|1H|A|412
5E81|1|1H|C|413
5E81|1|1H|C|414
5E81|1|1H|A|415
5E81|1|1H|C|416
5E81|1|1H|C|417
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 78
- 50S ribosomal protein L15
- Chain J8
- 50S ribosomal protein L28
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