HL_5EL4_104
3D structure
- PDB id
- 5EL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- UUUGAUCCUGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5EL4_104 not in the Motif Atlas
- Homologous match to HL_5J7L_001
- Geometric discrepancy: 0.1065
- The information below is about HL_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5EL4|1|1G|U|12
5EL4|1|1G|U|13
5EL4|1|1G|U|14
5EL4|1|1G|G|15
5EL4|1|1G|A|16
5EL4|1|1G|U|17
5EL4|1|1G|C|18
5EL4|1|1G|C|19
5EL4|1|1G|U|20
5EL4|1|1G|G|21
5EL4|1|1G|G|22
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 42
- 30S ribosomal protein S5
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