HL_5EL4_161

3D structure

PDB id

5EL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GCUAGGGGCCUCCAAAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL4|1|1H|G|875
5EL4|1|1H|C|876
5EL4|1|1H|U|877
5EL4|1|1H|A|878
5EL4|1|1H|G|879
5EL4|1|1H|G|880
5EL4|1|1H|G|881
5EL4|1|1H|G|882
5EL4|1|1H|C|893
5EL4|1|1H|C|894
5EL4|1|1H|U|895
5EL4|1|1H|C|897
5EL4|1|1H|C|898
5EL4|1|1H|A|899
5EL4|1|1H|A|900
5EL4|1|1H|A|901
5EL4|1|1H|C|902

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 1K

Transfer RNA; tRNA

Chain 88

50S ribosomal protein L16

Chain H8

50S ribosomal protein L25