HL_5EL4_164

3D structure

PDB id

5EL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CGAAGACAGCCGGUCGAG

Length

18 nucleotides

Bulged bases

5EL4|1|1H|A|1046

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL4|1|1H|C|1043
5EL4|1|1H|G|1044
5EL4|1|1H|A|1045
5EL4|1|1H|A|1046
5EL4|1|1H|G|1047
5EL4|1|1H|A|1048
5EL4|1|1H|C|1049
5EL4|1|1H|A|1050
5EL4|1|1H|G|1051
5EL4|1|1H|C|1052
5EL4|1|1H|C|1053
5EL4|1|1H|G|1106
5EL4|1|1H|G|1107
5EL4|1|1H|U|1108
5EL4|1|1H|C|1109
5EL4|1|1H|G|1110
5EL4|1|1H|A|1111
5EL4|1|1H|G|1112

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6