HL_5EL4_243

3D structure

PDB id

5EL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CGCCUCCGGGUG

Length

12 nucleotides

Bulged bases

5EL4|1|1H|C|2145, 5EL4|1|1H|C|2146, 5EL4|1|1H|G|2147

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL4|1|1H|C|2140
5EL4|1|1H|G|2141
5EL4|1|1H|C|2142
5EL4|1|1H|C|2143
5EL4|1|1H|U|2144
5EL4|1|1H|C|2145
5EL4|1|1H|C|2146
5EL4|1|1H|G|2147
5EL4|1|1H|G|2148
5EL4|1|1H|G|2149
5EL4|1|1H|U|2150
5EL4|1|1H|G|2151

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 2I

30S ribosomal protein S11