HL_5EL5_138
3D structure
- PDB id
- 5EL5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- CUUUUUG
- Length
- 7 nucleotides
- Bulged bases
- 5EL5|1|1H|U|163, 5EL5|1|1H|U|165
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5EL5_138 not in the Motif Atlas
- Geometric match to HL_4YAZ_004
- Geometric discrepancy: 0.2841
- The information below is about HL_4YAZ_004
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_48778.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 46
Unit IDs
5EL5|1|1H|C|155
5EL5|1|1H|U|161
5EL5|1|1H|U|162
5EL5|1|1H|U|163
5EL5|1|1H|U|164
5EL5|1|1H|U|165
5EL5|1|1H|G|171
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain J8
- 50S ribosomal protein L28
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