HL_5EL5_162

3D structure

PDB id

5EL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

CGAAGACAGCCGGUCGAG

Length

18 nucleotides

Bulged bases

5EL5|1|1H|A|1046, 5EL5|1|1H|G|1106

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL5|1|1H|C|1043
5EL5|1|1H|G|1044
5EL5|1|1H|A|1045
5EL5|1|1H|A|1046
5EL5|1|1H|G|1047
5EL5|1|1H|A|1048
5EL5|1|1H|C|1049
5EL5|1|1H|A|1050
5EL5|1|1H|G|1051
5EL5|1|1H|C|1052
5EL5|1|1H|C|1053
5EL5|1|1H|G|1106
5EL5|1|1H|G|1107
5EL5|1|1H|U|1108
5EL5|1|1H|C|1109
5EL5|1|1H|G|1110
5EL5|1|1H|A|1111
5EL5|1|1H|G|1112

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6