HL_5EL5_234

3D structure

PDB id

5EL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

UUAGUUGCCAGCGGUUCGGCCGGGCACUCUAA

Length

32 nucleotides

Bulged bases

5EL5|1|1G|G|1127, 5EL5|1|1G|C|1129, 5EL5|1|1G|U|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL5|1|1G|U|1121
5EL5|1|1G|U|1122
5EL5|1|1G|A|1123
5EL5|1|1G|G|1124
5EL5|1|1G|U|1125
5EL5|1|1G|U|1126
5EL5|1|1G|G|1127
5EL5|1|1G|C|1128
5EL5|1|1G|C|1129
5EL5|1|1G|A|1130
5EL5|1|1G|G|1131
5EL5|1|1G|C|1132
5EL5|1|1G|G|1133
5EL5|1|1G|G|1134
5EL5|1|1G|U|1135
5EL5|1|1G|U|1136
5EL5|1|1G|C|1137
5EL5|1|1G|G|1138
5EL5|1|1G|G|1139
5EL5|1|1G|C|1140
5EL5|1|1G|C|1141
5EL5|1|1G|G|1142
5EL5|1|1G|G|1143
5EL5|1|1G|G|1144
5EL5|1|1G|C|1145
5EL5|1|1G|A|1146
5EL5|1|1G|C|1147
5EL5|1|1G|U|1148
5EL5|1|1G|C|1149
5EL5|1|1G|U|1150
5EL5|1|1G|A|1151
5EL5|1|1G|A|1152

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 1A

30S ribosomal protein S10

Chain 82

30S ribosomal protein S9