HL_5EL5_235

3D structure

PDB id

5EL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GUCUGCAACCCGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5EL5|1|1G|G|1312
5EL5|1|1G|U|1313
5EL5|1|1G|C|1314
5EL5|1|1G|U|1315
5EL5|1|1G|G|1316
5EL5|1|1G|C|1317
5EL5|1|1G|A|1318
5EL5|1|1G|A|1319
5EL5|1|1G|C|1320
5EL5|1|1G|C|1321
5EL5|1|1G|C|1322
5EL5|1|1G|G|1323
5EL5|1|1G|A|1324
5EL5|1|1G|C|1325

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 1B

30S ribosomal protein Thx

Chain 4A

30S ribosomal protein S13

Chain 5A

30S ribosomal protein S14 type Z

Chain AA

30S ribosomal protein S19