HL_5FCI_030

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCI_030 not in the Motif Atlas

Homologous match to HL_8P9A_142

Geometric discrepancy: 0.0929

The information below is about HL_8P9A_142

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

5FCI|1|1|C|1403
5FCI|1|1|G|1404
5FCI|1|1|U|1405
5FCI|1|1|A|1406
5FCI|1|1|A|1407
5FCI|1|1|G|1408

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain O2

60S ribosomal protein L32