HL_5FCI_076

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CCUUUG

Length

6 nucleotides

Bulged bases

5FCI|1|2|U|194

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCI_076 not in the Motif Atlas

Geometric match to HL_8C3A_002

Geometric discrepancy: 0.2967

The information below is about HL_8C3A_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22523.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

5FCI|1|2|C|190
5FCI|1|2|C|191
5FCI|1|2|U|192
5FCI|1|2|U|193
5FCI|1|2|U|194
5FCI|1|2|G|195

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S8

40S ribosomal protein S8-A