HL_5FCI_084

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UAAUUCA

Length

7 nucleotides

Bulged bases

5FCI|1|2|A|452, 5FCI|1|2|U|454, 5FCI|1|2|C|455

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCI_084 not in the Motif Atlas

Homologous match to HL_8P9A_201

Geometric discrepancy: 0.1991

The information below is about HL_8P9A_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.6

Basepair signature

cWW-F-F

Number of instances in this motif group

22

Unit IDs

5FCI|1|2|U|450
5FCI|1|2|A|451
5FCI|1|2|A|452
5FCI|1|2|U|453
5FCI|1|2|U|454
5FCI|1|2|C|455
5FCI|1|2|A|456

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain D4

40S ribosomal protein S24-A

Chain S4

40S ribosomal protein S4-A