3D structure

PDB id
5FCI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the vacant uL3 W255C mutant 80S yeast ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
GAAGAGACGUUUCUUU
Length
16 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5FCI|1|5|G|2437
5FCI|1|5|A|2438
5FCI|1|5|A|2439
5FCI|1|5|G|2440
5FCI|1|5|A|2441
5FCI|1|5|G|2442
5FCI|1|5|A|2443
5FCI|1|5|C|2444
5FCI|1|5|G|2503
5FCI|1|5|U|2504
5FCI|1|5|U|2505
5FCI|1|5|U|2506
5FCI|1|5|C|2507
5FCI|1|5|U|2508
5FCI|1|5|U|2509
5FCI|1|5|U|2510

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain l8
60S ribosomal protein L8-A
Chain o6
60S ribosomal protein L36-A
Chain s1
40S ribosomal protein S1-A

Coloring options:

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