HL_5FCI_204

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UCCUUGUGG

Length

9 nucleotides

Bulged bases

5FCI|1|6|U|718, 5FCI|1|6|U|719

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCI_204 not in the Motif Atlas

Geometric match to HL_5ID6_001

Geometric discrepancy: 0.2098

The information below is about HL_5ID6_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

5FCI|1|6|U|715
5FCI|1|6|C|716
5FCI|1|6|C|717
5FCI|1|6|U|718
5FCI|1|6|U|719
5FCI|1|6|G|720
5FCI|1|6|U|721
5FCI|1|6|G|722
5FCI|1|6|G|723

Current chains

Chain 6

18S ribosomal RNA

Nearby chains