HL_5FCI_208
3D structure
- PDB id
- 5FCI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5FCI_208 not in the Motif Atlas
- Homologous match to HL_8P9A_209
- Geometric discrepancy: 0.1022
- The information below is about HL_8P9A_209
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
5FCI|1|6|A|900
5FCI|1|6|G|901
5FCI|1|6|G|902
5FCI|1|6|U|903
5FCI|1|6|G|904
5FCI|1|6|A|905
5FCI|1|6|A|906
5FCI|1|6|A|907
5FCI|1|6|U|908
5FCI|1|6|U|909
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c4
- 40S ribosomal protein S14-A
- Chain d6
- 40S ribosomal protein S26-A
- Chain s5
- 40S ribosomal protein S5
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