HL_5FCI_244

3D structure

PDB id

5FCI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GCUAACCUUGAGUCCUUGUGGCUCUUGGCGAAC

Length

33 nucleotides

Bulged bases

5FCI|1|2|U|719, 5FCI|1|2|U|721, 5FCI|1|2|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FCI|1|2|G|703
5FCI|1|2|C|704
5FCI|1|2|U|705
5FCI|1|2|A|706
5FCI|1|2|A|707
5FCI|1|2|C|708
5FCI|1|2|C|709
5FCI|1|2|U|710
5FCI|1|2|U|711
5FCI|1|2|G|712
5FCI|1|2|A|713
5FCI|1|2|G|714
5FCI|1|2|U|715
5FCI|1|2|C|716
5FCI|1|2|C|717
5FCI|1|2|U|718
5FCI|1|2|U|719
5FCI|1|2|G|720
5FCI|1|2|U|721
5FCI|1|2|G|722
5FCI|1|2|G|723
5FCI|1|2|C|724
5FCI|1|2|U|725
5FCI|1|2|C|726
5FCI|1|2|U|727
5FCI|1|2|U|728
5FCI|1|2|G|729
5FCI|1|2|G|730
5FCI|1|2|C|731
5FCI|1|2|G|732
5FCI|1|2|A|733
5FCI|1|2|A|734
5FCI|1|2|C|735

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain S4

40S ribosomal protein S4-A

Chain S6

40S ribosomal protein S6-A