HL_5FCJ_006

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAUAG

Length

5 nucleotides

Bulged bases

5FCJ|1|1|U|210, 5FCJ|1|1|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCJ_006 not in the Motif Atlas

Geometric match to HL_4V9F_011

Geometric discrepancy: 0.0912

The information below is about HL_4V9F_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

5FCJ|1|1|C|208
5FCJ|1|1|A|209
5FCJ|1|1|U|210
5FCJ|1|1|A|211
5FCJ|1|1|G|212

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain L4

60S ribosomal protein L4-A

Chain N6

60S ribosomal protein L26-A