HL_5FCJ_055

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

5FCJ|1|1|G|2618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5FCJ_055 not in the Motif Atlas

Homologous match to HL_8P9A_165

Geometric discrepancy: 0.1054

The information below is about HL_8P9A_165

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

5FCJ|1|1|C|2616
5FCJ|1|1|U|2617
5FCJ|1|1|G|2618
5FCJ|1|1|G|2619
5FCJ|1|1|G|2620
5FCJ|1|1|G|2621
5FCJ|1|1|C|2622
5FCJ|1|1|G|2623
5FCJ|1|1|G|2624

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain M0

60S ribosomal protein L10

Chain N9

60S ribosomal protein L29